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Introduction to DC Biologics
Reaction Lab
Introduction
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Simulator
Simulator module
About Simulator
Getting started in testing and using a model
Equations being solved in Simulator
Managing Models
Opening a model in Simulator
Closing Scenarios in Simulator
Updating a model from Simulator
Simulation conditions
Setting Reaction kinetics in Simulator
Setting Model parameters in Simulator
Running models
Simulation Run controls
Running simulations with defaults
Set solver properties for simulation
Factors that affect simulation run time
Simulation results
List all phases and rates in a model
View simulation results as a Dynamic Table
Charts
About Main simulation chart
Using the Chart tools
Edit the data series displayed in a chart
Change the chart layout
Set up data analysis functions on simulation series
Exporting data
Export Scenario results
Troubleshooting simulations
Troubleshoot simulation event log messages
Simulation doesn't run
Simulation runs slowly
Fitting
Fitting module
About Fitting
Role of manual fitting
Example workflows with multiple fitting exercises
Managing Models
Opening a new fitting exercise
Closing a fitting exercise
Updating a model with fitted values
Select data to fit
Selecting the method for using data in a fitting exercise
Selecting Scenarios to use for fitting
Setting data series to use for fitting
Setting errors on a data series
Viewing and editing data in Fitting
Set parameters to be fitted
Setting up a parameter list in Fitting
Set initial guesses and constraints on parameters to be fitted
Controlling a fitting run
Fitting run controls
Run a fitting exercise with default settings
Set fitting algorithm and tolerance
Set solver properties to be used during fitting exercise
Fitting Results
Fitted values and confidence intervals
Fitting results chart
Sum of squares (SSQ) table
Correlation matrix
Preview fitting statistics
Exporting data
Export fitting results
Troubleshoot fitting
Troubleshoot fitting Event Log messages
Fitting doesn't run
Fitting runs slowly
Fitting exercise produced a poor fit
Optimization
Optimization module
About Optimization
Experimental validation of Optimization results
Managing Models
Opening a new optimization exercise
Closing an optimization exercise
Updating a model with optimized scenario(s)
Set response to be optimized
Defining objective functions for optimization
Set objective function
Set factors to be varied
Selecting factors for optimization exercise
Controlling an Optimization run
Optimization run controls
Run an optimization exercise with default settings
Set solver properties to be used during optimization exercise
Optimization results
Optimization results chart
Exporting data
Export optimization results
Troubleshoot optimization
Troubleshoot optimization Event log messages
Optimization doesn't run
Optimization runs slowly
RunScript Automation
Introduction to RSA